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PO22
Precision OncologyDissecting cancer genomes for tailored cancer treatmentsTimetable (provisional) |
PO22 | Precision Oncology |
Monday May 9th |
Day #1 - Introduction and methods
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09:30 - 10:00 |
Introduction to the course and self presentation of the participants |
10:00 - 11:00 | Personalised Medicine |
11:00 - 11:30 | Coffee Break |
11:30 - 12:30 | Workflow |
12:30 - 14:00 | Lunch Break |
14:00 - 16:00 | Data Formats |
16:00 - 16:30 | Tea Break |
16:30 - 18:00 | Quality Control |
Tuesday May 10th |
Day #2 - Variant Calling
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09:30 - 10:00 | Morning Wrap-up (what have we done so far?) |
10:00 - 11:00 | NGS I: Variant detection |
11:00 - 11:30 | Coffee Break |
11:30 - 12:30 | Exercise I |
12:30 - 14:00 | Lunch Break |
14:00 - 16:00 | Exercise II - Part 1 |
16:00 - 16:30 | Tea Break |
16:30 - 18:00 | Exercise II - Part 2 |
Wednesday May 11th |
Day #3 - Annotation and filtering
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09:30 - 10:00 | Morning Wrap-up (what have we done so far?) |
10:00 - 11:00 | NGS II: Variant annotation |
11:00 - 11:30 | Coffee Break |
11:30 - 12:30 | Exercise: Variant annotation |
12:30 - 14:00 | Lunch Break |
14:00 - 16:00 | Selecting the most relevant variants |
16:00 - 16:30 | Tea Break |
16:30 - 18:00 | Exercise: Variant prioritization |
Thursday May 12th |
Day #4 - Interpretation of the results
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09:30 - 10:00 | Morning Wrap-up (what have we done so far?) |
10:00 - 11:00 | PanDrugs: Matching mutations with therapies |
11:00 - 11:30 | Coffee Break |
11:30 - 12:30 | Exercise: Running PanDrugs |
12:30 - 14:00 | Lunch Break |
14:00 - 16:00 | Cancer Genomics Resources |
16:00 - 16:30 | Tea Break |
16:30 - 18:00 | Exercise: cBioPortal |
Friday May 13th |
Day #5 - Case studies in Personalized cancer medicine
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09:30 - 10:00 | Morning Wrap-up (what have we done so far?) |
10:00 - 11:00 | Analysis I |
11:00 - 11:30 | Coffee Break |
11:30 - 12:30 | Analysis II |
12:30 - 14:00 | Lunch Break |
14:00 - 16:00 | Interpretation and discussion |
16:00 - 16:30 | Tea Break |
16:30 - 18:00 | Final wrap-up session |
Course Homepage |
Instituto Gulbenkian de Ciência, Apartado 14, 2781-901 Oeiras, Portugal Last updated: April 10th 2022 |