PO22

Precision Oncology

Dissecting cancer genomes for tailored cancer treatments
Timetable (provisional)

PO22	Precision Oncology
Monday May 9th	Day #1 - Introduction and methods
09:30 - 10:00	Introduction to the course and self presentation of the participants
10:00 - 11:00	Personalised Medicine
11:00 - 11:30	Coffee Break
11:30 - 12:30	Workflow
12:30 - 14:00	Lunch Break
14:00 - 16:00	Data Formats
16:00 - 16:30	Tea Break
16:30 - 18:00	Quality Control
Tuesday May 10th	Day #2 - Variant Calling
09:30 - 10:00	Morning Wrap-up (what have we done so far?)
10:00 - 11:00	NGS I: Variant detection
11:00 - 11:30	Coffee Break
11:30 - 12:30	Exercise I
12:30 - 14:00	Lunch Break
14:00 - 16:00	Exercise II - Part 1
16:00 - 16:30	Tea Break
16:30 - 18:00	Exercise II - Part 2
Wednesday May 11th	Day #3 - Annotation and filtering
09:30 - 10:00	Morning Wrap-up (what have we done so far?)
10:00 - 11:00	NGS II: Variant annotation
11:00 - 11:30	Coffee Break
11:30 - 12:30	Exercise: Variant annotation
12:30 - 14:00	Lunch Break
14:00 - 16:00	Selecting the most relevant variants
16:00 - 16:30	Tea Break
16:30 - 18:00	Exercise: Variant prioritization
Thursday May 12th	Day #4 - Interpretation of the results
09:30 - 10:00	Morning Wrap-up (what have we done so far?)
10:00 - 11:00	PanDrugs: Matching mutations with therapies
11:00 - 11:30	Coffee Break
11:30 - 12:30	Exercise: Running PanDrugs
12:30 - 14:00	Lunch Break
14:00 - 16:00	Cancer Genomics Resources
16:00 - 16:30	Tea Break
16:30 - 18:00	Exercise: cBioPortal
Friday May 13th	Day #5 - Case studies in Personalized cancer medicine
09:30 - 10:00	Morning Wrap-up (what have we done so far?)
10:00 - 11:00	Analysis I
11:00 - 11:30	Coffee Break
11:30 - 12:30	Analysis II
12:30 - 14:00	Lunch Break
14:00 - 16:00	Interpretation and discussion
16:00 - 16:30	Tea Break
16:30 - 18:00	Final wrap-up session

Course Homepage

Instituto Gulbenkian de Ciência,

Apartado 14, 2781-901 Oeiras, Portugal

GTPB Homepage

IGC Homepage

Last updated: April 10th 2022