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ENSGEN09
ENSEMBL: Browsing Genes and Genomes, Mining with BIOMARTCourse Timetable (provisional) |
| ENSGEN09 | ENSEMBL: Browsing Genes and Genomes, Mining with BIOMART |
| Tue, March 31st |
Day #1
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| 09:30 - 11:00 | Introduction to Ensembl: origin, goals and organisation of the Ensembl project |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Worked example: guided tour of the most important pages of the Ensembl website |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | Data mining with BioMart: retrieving larger and/or more complex datasets using the data mining tool BioMart |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | Genebuild: how are Ensembl gene and transcripts predictions made? |
| Wed, April 1st |
Day #2
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| 09:30 - 11:00 | Comparative genomics and proteomics: orthologues and paralogues, protein families, whole genome alignments and syntenic regions |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Variations: SNPs |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | Advanced access & custom annotation: other ways of accessing Ensembl data, uploading your own data |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | Help with selected research-related problems that attendees may bring-in. |
| Course Homepage |
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Instituto Gulbenkian de Ciência, Apartado 14, 2781-901 Oeiras, Portugal Last updated: March 2nd 2009 |