MMPG09
Molecular Markers and Population GeneticsCourse Timetable |
MMPG09 | Molecular Markers and Population Genetics |
Mon, December 14th |
Summarising Genetic Diversity Day #1
|
09:30 - 11:00 | Back to basics: Measures of genetic diversity. |
11:00 - 11:30 | Coffee Break |
11:30 - 12:30 | Practical Introduction to Arlequin and Genetix. |
12:30 - 14:00 | Lunch Break |
14:00 - 16:00 | Practical Introduction to the R statistical language |
16:00 - 16:30 | Tea Break |
16:30 - 18:00 | Practical application of R: simple simulations of genetic drift |
Tue, December 15th |
Population Structure and Assignment Day #2
|
09:30 - 11:00 | Introduction to assignment and to Structure. |
11:00 - 11:30 | Coffee Break |
11:30 - 12:30 | Practicals: use of Structure and Geneclass2 (I) |
12:30 - 14:00 | Lunch Break |
14:00 - 16:00 | Practicals: use of Structure and Geneclass2 (II) |
16:00 - 16:30 | Tea Break |
16:30 - 18:00 | Discussion and Summary of the first two days |
Wed, December 16th |
The Coalescent and Principles of Population Genetics Inference Day #3
|
09:30 - 11:00 | Introduction to the coalescent and to simulations using ms and Gms. |
11:00 - 11:30 | Coffee Break |
11:30 - 12:30 | Practicals: MCMC and ABC with examples using R and ms (I) |
12:30 - 14:00 | Lunch Break |
14:00 - 16:00 | Practicals: MCMC and ABC with examples using R and ms (II) |
16:00 - 16:30 | Tea Break |
16:30 - 18:00 | Practicals: MCMC and ABC with examples using R and ms (III) |
Thu, December 17th |
Inferring demographic history Day #4
|
09:30 - 11:00 | Practicals: use of Bottleneck and Msvar |
11:00 - 11:30 | Coffee Break |
11:30 - 12:30 | Practicals: use of Bottleneck and Msvar |
12:30 - 14:00 | Lunch Break |
14:00 - 16:00 | Practicals: use of IM |
16:00 - 16:30 | Tea Break |
16:30 - 18:00 | Practicals: use of LEA |
Fri, December 18th |
Detecting Selection Day #5
|
09:30 - 11:00 | Practicals: use of Fdist |
11:00 - 11:30 | Coffee Break |
11:30 - 12:30 | Practicals: use of BayesFST |
12:30 - 14:00 | Lunch Break |
14:00 - 16:00 | Final Discussion / Course Wrap Up |
16:00 - 16:30 | Tea Break |
Course Homepage |
Instituto Gulbenkian de Ciência, Apartado 14, 2781-901 Oeiras, Portugal Last updated: May 4th 2009 |