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SGDD10
Structural Genomics and Drug DesignCourse Timetable (provisional) |
| SGDD10 | Structural Genomics and Drug Design |
| Mon, Sept 20th |
Day #1
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| 09:30 - 11:00 | Structure-based drug design |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Protein structure determination |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | PYMOL, PDBSUM |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | PDBBIND DATABASE, LIGANDINFO-CNIO |
| Tue, Sept 21st |
Day #2
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| 09:30 - 11:00 | Template search and Target-template alignment |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Model building and model assessment |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | MODELLER basic example |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | MODELLER your own example or advanced example |
| Wed, Sept 22nd |
Day #3 |
| 09:30 - 11:00 | Single Nucleotide Porlymorfism and Binding site prediction |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Protein-Ligand Docking with AutoDock |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | AutoDock tutorial |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | AutoDock tutorial |
| Wed, Sept 23rd |
Day #4
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| 09:30 - 11:00 | Chemical libraries, Pharmacophore analysis |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Chemimformaticschemical compound analysis |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | SMILES, PUBCHEM, DRUGBANK, ZINC |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | LIGAND.INFO, LIGANDSCOUT |
| Fri, Sept 24th |
Day #5
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| 09:30 - 11:00 |
Practical application to the HIV drug resistance
A full day exploration of this theme using the tecniques covered in the course. |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Excercise, continued |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | Exercise, continued |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | Final Discussion / Course Wrap Up |
| Course Homepage |
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Instituto Gulbenkian de Ciência, Apartado 14, 2781-901 Oeiras, Portugal Last updated: August 1st 2010 |