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BPBR15
Bioinformatics using Python for Biomedical ResearchersTimetable (provisional) |
| BPBR15 | Detailed Program |
| Mon, July 20th |
Getting Started - Day #1
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| 09:30 - 11:00 |
Welcome session.
Time to introduce ourselves, and to discover each other's expectations for the coming week. A soft introduction to the working environment. |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Unix (Linux) Tutorial |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | Python Shell |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | Python Programs |
| Tue, July 21st |
Parsing - Day #2
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| 09:30 - 11:00 |
Morning Wrap-up (what have we done so far?) Repeating things |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Reading files |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | Parsing |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | Parsing |
| Wed, July 22nd |
Managing data - Day #3
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| 09:30 - 11:00 |
Morning Wrap-up (what have we done so far?) Functions |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Debugging |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 |
Data columns (formatting and sorting) |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | Tabular data |
| Thu, July 23rd |
Libraries - Day #4
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| 09:30 - 11:00 |
Morning Wrap-up (what have we done so far?) Searching |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Pipelines |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 |
Python Libraries (BioPython, Pattern matching, plotting, using R, Pandas) |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | Python Libraries |
| Fri, July 24th |
Hackaton: using Python - Day #5
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| 09:30 - 11:00 |
Morning Wrap-up (what have we done so far?) Hackaton I |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Hackaton II |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | Hackaton III |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 |
Outcomes versus expectations Final Wrap-up session |
| Course Homepage |
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Instituto Gulbenkian de Ciência, Apartado 14, 2781-901 Oeiras, Portugal Last updated: June 3rd 2015 |