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PDA15
Proteomics Data AnalysisTimetable (provisional) |
| PDA15 | Proteomics Data Analysis |
| Mon, Sept 7th |
Day #1
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| 09:30 - 11:00 |
Introduction. Mass spectrometry based proteomics (I). |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Mass spectrometry based proteomics (II). |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 |
Sequence databases and raw file conversion. Summary and questions. |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 |
Searching data and viewing the results. Summary and questions. |
| Tue, Sept 8th |
Day#2
|
| 09:30 - 11:00 |
Morning Wrap-up (what have we done so far?)
Protein identification. |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Protein inference. |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 |
Protein validation and functional analysis. Summary and questions. |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 |
Sharing and reprocessing proteomics data. Summary and questions. |
| Wed, Sept 9th |
Day#3
|
| 09:30 - 11:00 |
Morning Wrap-up (what have we done so far?)
Protein quantification. |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Experimental design. |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 |
Protein quantification. Summary and questions. |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 |
Post-quantification data interpretation. Summary and questions. |
| Thu, Sept 10th |
Day#4
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| 09:30 - 11:00 |
Morning Wrap-up (what have we done so far?)
Bioinformatics tools for quantification. |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Discussion on data analysis strategies. |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 |
Q&A + Analyze your own data! Summary and questions. |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 |
Q&A + Analyze your own data! Summary and questions. Final discussion. Course wrap-up session. |
| Course Homepage |
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Instituto Gulbenkian de Ciência, Apartado 14, 2781-901 Oeiras, Portugal Last updated: June 26th 2015 |