GTDA16

Genomic and Transcriptomic Data Analysis

Timetable (provisional)
GTDA16 Genomic and Transcriptomic Data Analysis
Wed, May 18th
Day #1
09:30 - 11:00 Introduction. Familiarization with the working environment. NGS technology update.
11:00 - 11:30 Coffee Break
11:30 - 12:30 Primary Analysis: Quality Control for Raw Data
12:30 - 14:00 Lunch Break
14:00 - 16:00 Primary Analysis: Quality Control for Raw Data
16:00 - 16:30 Tea Break
16:30 - 18:00 Primary Analysis: Mapping NGS Reads and Visualisation
Thu, May 19th
Day #2
09:30 - 11:00 Morning Wrap-up (what have we done so far?)
Biological and Clinical Databases. CellBase. CSVS
11:00 - 11:30 Coffee Break
11:30 - 12:30 Panel of Genes: Design and Analysis for Clinical Applications. TEAM
12:30 - 14:00 Lunch Break
14:00 - 16:00 Panel of Genes: Design and Analysis for Clinical Applications. TEAM
16:00 - 16:30 Tea Break
16:30 - 18:00 Prioritization of Variants and Genes: BiERapp
Fri, May 20th
Day #3
09:30 - 11:00 Morning Wrap-up (what have we done so far?)
RNA-Seq Data: Differential Expression
11:00 - 11:30 Coffee Break
11:30 - 12:30 RNA-Seq Data: Clustering and Supervised Classification Analysis
12:30 - 14:00 Lunch Break
14:00 - 16:00 Functional Profiling from Babelomics 5
16:00 - 16:30 Tea Break
16:30 - 18:00 Functional Profiling from Babelomics 5
Final Wrap-up discussion.
Course Homepage

Instituto Gulbenkian de Ciência,

Apartado 14, 2781-901 Oeiras, Portugal

GTPB Homepage

IGC Homepage

Last updated:   April 22nd 2016