PM16

Precision medicine

NGS variant analysis and interpretation for translational research
Timetable
PM16 Precision medicine
Tue, Sept 27th
Day #1 - Introduction and methods
09:30 - 11:00 Introduction to the course and self presentation of the participants
Personalised Medicine
11:00 - 11:30 Coffee Break
11:30 - 12:30 NGS I: Variant detection
12:30 - 14:00 Lunch Break
14:00 - 16:00 Playing with the data and the methods
16:00 - 16:30 Tea Break
16:30 - 18:00 First exercise: Running the pipeline
Wed, Sept 28th
Day #2 - Annotation and filtering
09:30 - 11:00 Morning Wrap-up (what have we done so far?)
NGS II: Variant annotation
11:00 - 11:30 Coffee Break
11:30 - 12:30 Second Exercise: Running the pipeline
12:30 - 14:00 Lunch Break
14:00 - 16:00 Selecting the most relevant variants: How to filter
16:00 - 16:30 Tea Break
16:30 - 18:00 Third Exercise: Playing with the results
Thu, Sep 29th
Day #3 - Interpretation of the results
09:30 - 11:00 Morning Wrap-up (what have we done so far?)
Pharmacogenomics
11:00 - 11:30 Coffee Break
11:30 - 12:30 PanDrugs: Matching mutations with therapies
12:30 - 14:00 Lunch Break
14:00 - 16:00 Fourth Exercise: Running PanDrugs
16:00 - 16:30 Tea Break
16:30 - 18:00 Fifth Exercise: Playing with the results
Fri, Sept 30th
Day #4 - Case studies in Personalized cancer medicine
09:30 - 11:00 Morning Wrap-up (what have we done so far?)
Analysis I
11:00 - 11:30 Coffee Break
11:30 - 12:30 Analysis II
12:30 - 14:00 Lunch Break
14:00 - 16:00 Interpretation and discussion
16:00 - 16:30 Tea Break
16:30 - 18:00 Final wrap-up session
Course Homepage

Instituto Gulbenkian de Ciência,

Apartado 14, 2781-901 Oeiras, Portugal

GTPB Homepage

IGC Homepage

Last updated:   Aug 2nd 2016