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PDA19
Proteomics Data AnalysisTimetable (provisional) |
| PDA19 | Proteomics Data Analysis |
| Mon, April 1st |
Day #1
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| 09:30 - 11:00 |
Introductions and expectations. Mass spectrometry based proteomics (I). |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Mass spectrometry based proteomics (II). |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 |
Sequence databases and raw file conversion. Summary and questions. |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 |
Searching data and viewing the results (I). Summary and questions. |
| Tue, April 2nd |
Day#2
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| 09:30 - 11:00 |
Summary of Day 1. Wrap-up (what have we done so far?)
Searching data and viewing the results (I). |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Searching data and viewing the results (II). |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 |
Protein inference. Summary and questions. |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 |
Protein validation Summary and questions. |
| Wed, April 3rd |
Day#3
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| 09:30 - 11:00 |
Summary of Day 2. Wrap-up (what have we done so far?)
FDR, reliability and decoys. |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | FDR, reliability and decoys |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 | FDR, reliability and decoys Summary and questions. |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 |
Data sharing Summary and questions. |
| Thu, Apr 4th |
Day#4
|
| 09:30 - 11:00 |
Summary of Day 3. Wrap-up (what have we done so far?)
Quant data preprocessing & summarization. |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Quant data preprocessing & summarization. |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 |
Differential analysis. Summary and questions. |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 |
Differential analysis. Summary and questions. |
| Fri, Apr 5th |
Day#5
|
| 09:30 - 11:00 |
Summary of Day 4. Wrap-up (what have we done so far?)
Experimental design. |
| 11:00 - 11:30 | Coffee Break |
| 11:30 - 12:30 | Experimental design. |
| 12:30 - 14:00 | Lunch Break |
| 14:00 - 16:00 |
Experimental design Summary and questions. |
| 16:00 - 16:30 | Tea Break |
| 16:30 - 18:00 | Final wrap-up and Questions. |
| Course Homepage |
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Instituto Gulbenkian de Ciência, Apartado 14, 2781-901 Oeiras, Portugal Last updated: Feb 19th |